Systems Medicine Seminar

All LSM seminars are held on Tuesdays at 4:00 PM Eastern Time, unless otherwise noted.  If you have questions regarding future seminars, please contact us at DOM-LabforSysMedicin@ad.ufl.edu.

Upcoming Seminars

Tuesday, JuLY 16, 2024

Dr. Austin Baird

Whole Body Physiology Model to Simulate Respiratory Depression of Fentanyl and Associated Naloxone Reversal – A Model Informed Repeat Dosing Analysis

Austin Baird

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Past Seminars

April 9, 2024 – Nick Cogan, Ph.D., Associate Professor – Two versions of anticancer treatments combining theoretical and experimental studies – Read More

April 2, 2024 – Yong Huang, Ph.D., Professor – Novel Implementation of Three-Dimensional Bioprinting – Read More

March 26, 2024 – Dr. Pablo Santiago Rivadeneira Paz – Artificial Pancreas in Colombia: from idealization to reality – Read More

March 21, 2024 – Eirini Tsirvouli – Dynamic Boolean modeling of psoriasis – Read More

March 19, 2024 – Dr. Marissa Renardy – A multi-scale semi-mechanistic CK/PD model for CAR T-cell therapy – Read More

March 12, 2024 – Dr. Wenrui Hao – Harness computational modeling to understand biomedical diseases – Read More

February 27, 2024 – Dr. Samsun Lampotang – Applying models to simulations in healthcare – Read More

January 23, 2024 – Dr. Ivan Ramirez Zuniga – Modeling the Energy Requirements of an Acute Immune Response during Sepsis. – Read More

January 17, 2024 – Dr. Naoki Masuda – Network medicine: From gene co-expression patterns to health-related behavior – Read More

January 16, 2024 – Dr. Ahmed Elmokadem – Rise of the Machines: Will Machine Learning Take Over the World of Pharmacometrics? – Read More

November 7, 2023 – Dr. Rachel Clipp – Towards a Human Physiological Digital Twin with the Pulse Physiology Engine – Read More

November 7, 2023 – Dr. Christina Durón – A coupled spatial-network model for epidemiology – Read More

November 7, 2023 – Dr. Hannah Kravitz – A coupled spatial-network model for epidemiology – Read More

November 6, 2023 – Dr. Josef Neu – Brainstorming AI and Digital Twin Applications for Neonatal Intensive Care – Read More

October 31, 2023 – Dr. Michelle Bartolo – Patient-Specific Mathematical Modeling of Pulmonary Hypertension – Read More

October 24, 2023 – Dr. Takis Benos – Interpretable machine learning models for medical research – Read More

October 17, 2023 – Bryana N. Harris, Ph.D. Candidate – Systems approach to identify novel mechanisms driving cardiomyocyte proliferation – Read More

October 5, 2023 – Vincent Gureghian – A new role for interferon gamma in facilitating senescence escape in melanoma – Read More

September 26, 2023 – Dr. Ziwen Yu – A Staged QAQC Method for IoT Based Environment Monitoring – Read More

September 12, 2023 – Dr. Boone M. Prentice – Spatial metabolomics during infection enabled by imaging mass spectrometry – Read More

September 7, 2023 – Dr. Thomas Asikis & Dr. Lucas Böttcher – Simulation and Control of High-dimensional Dynamical Systems – Read More

August 28, 2023 – Dr. Ziwen Yu – A Staged QAQC Method for IoT Based Environment Monitoring – Read More

August 17, 2023 – Dr. Ximena Fernandez – Topological Biomarkers for Real-Time Detection of Epileptic Seizures – Read More

July 10, 2023 – Tien Comlekoglu – Affiliation: University of Virginia – Read More

June 29, 2023 – Dr. Alexia Giannoula – Systems-medicine temporal analysis of patient disease trajectories – Read More

June 20, 2023 – Megan Haase – Agent-Based Model Predicts How Altered Cytokine Dynamics Enhances Skeletal Muscle Regeneration – Read More

June 13, 2023 – Dr. James R. Brown – Integrative Data Analysis in Drug Discovery – Read More

June 6, 2023 – Dr. Mette Olufsen – Patient-Specific Blood Flow and Pressure Prediction in Arterial Networks – Read More

May 9, 2023 – Dr. Jesse Kreger – Mathematically modeling myeloid-derived suppressor cells and cancer dynamics in diverse tumor microenvironments – Read More

May 2, 2023 – Dr. Stacey Finley – Computational modeling of the tumor ecosystem – Read More

April 25, 2023 – Hannah Anderson – Affiliation: University of Florida – Read More

March 28, 2023 – Dr. Anna Konstorum – Decomposition Methods For High-Dimensional Data: Making Interpretability A Priority – Read More

March 21, 2023 – Amanda Shick – Affiliation: UF Department of Mechanical and Aerospace Engineering (Laboratory of Amor Menezes) – Read More

March 7, 2023 – Dr. Julio Belmonte – Developing Multi-Scale Cell-Centered Models for Disease and Morphogenesis – Read More

February 21, 2023 – Dr. Anne Donnelly – Mentoring Undergraduate Researchers – Read More

January 31, 2023 – Dr. Stephan Schmidt – Empowering Translational Research Through Data Integration – Read More

December 13, 2022 – Jiachang Liu – FasterRisk: Fast and Accurate Interpretable Risk Scores – Read More

December 12, 2022 – Student Symposium – Agenda

December 8, 2022 – Dr. Maria Rodriguez Martinez – Interpretable Deep Learning For Cancer Personalized Medicine – Read More

December 1, 2022 – Dr. Hao Ye – Informed Inference in a Sea of Complexity – Read More

November 22, 2022 – Dr. Mohammad Zahid – Modeling Tumor Volume Dynamics to Personalize Radiotherapy for Head and Neck Cancer – Read More

November 1, 2022 – Iryna Hartsock – Topological data analysis and its applications to biological data – Read More

October 27, 2022 – Dr. Francesco Pappalardo – Universal Immune System Simulator applied to respiratory infectious diseases – Read More

October 13, 2022 – Dr. Thomas Woolley – The Power of Noise – Read More

July 26, 2022 – Dr. Sanjay R. Kharche – Multi-scale and multi-physics digital twins of mammalian organs – Read More

July 19, 2022 – Dr. Borui Zhang – Affiliation: Department of Medicine, University of Florida – Read More

July 19, 2022 – Hannah Norton – Affiliation: Department of Medicine, University of Florida – Read More

July 5, 2022 – Dr. Kasia Rejniak – Micro-pharmacology: Modeling the Tissue Barriers in Cancer Therapies – Read More

June 28, 2022 – Dr. Veronica Ciocanel – Modeling and Topological Data Analysis For Biological Ring Channel Dynamics – Read More

June 21, 2022 – Dr. Manu Aggarwal – Dory: Overcoming Barriers to Computing Persistent Homology – Read More

June 7, 2022 – Dr. Cynthia Wilson Garvan – Apple, Tree, Orchard: Observations on the Balance of Theory and Application in University of Florida’s Mathematical Sciences Ecosystem – Read More

May 31, 2022 – Dr. Hayriye Gulbudak – Multi-Scale Structured Models of Infectious Disease Dynamics – Read More

May 17, 2022 – Dr. Cameron Browne – Connecting evolutionary genetics and ecological dynamics with multi-strain pathogen models – Read More

May 10, 2022 – Student Research Symposium – Cardiology Conference Room, Laboratory for Systems Medicine – Agenda

April 26, 2022 – Dr. Vincent Major – Best Practices to Develop AI For Health: Some (Very) Applied Tips – Read More

April 19, 2022 – Dr. T.J. Sego – Enabling the Future of Biological and Biomedical Sciences with Advanced Modeling, Software and Computing – Read More

April 12, 2022 – Dr. Jeffrey West – Dose Response Curvature Predicts Optimal Adaptive Treatment Scheduling – Read More

April 5, 2022 – Dr. Andy Stein – Assessing The Uncertainty and Predictive Accuracy of Mechanistic Models: With Applications in CML – Read More

March 29, 2022 – Dr. Xiwei Tang – Individualized Multi-directional Variable Selection – Read More

March 22, 2022 – Dr. Carl Panetta – Study Design and Therapeutic Drug Monitoring in Pediatric Cancer: A Modeling and Simulation Approach – Read More

March 8, 2022 – Dr. Suzanne Sindi – Using Mathematical Models to Study Heterogeneous Yeast Colony Prion Phenotypes – Read More

March 1, 2022 – Dr. Simon R. Phillpot – Immuno-Oncology in Three Dimensions: Simulation and Experiments – Read More

March 1, 2022 – Dr. W. Gregory Sawyer – Immuno-Oncology in Three Dimensions: Simulation and Experiments – Read More

February 22, 2022 – Dr. Jaimit Parikh – Application of Uncertainty Quantification and Sensitivity Analysis Methods to Quantitative Pharmacology Models – Read More

January 25, 2022 – Dr. James Fairbanks – Computational Modeling With Category Theory – Read More

January 18, 2021 – Dr. Karin Leiderman – A Systems Biology Approach to Identifying Modifiers of Bleeding in Hemophilia – Read More

January 11, 2021 – Dr. Mark Transtrum – Using Simple Models to Understand Complex Biological Processes – Read More

January 4, 2021 – Dr. Karamatou Yacoubou Djima – Explaining Autism Spectrum Disorder with Placenta via Machine Learning – Read More

December 16, 2021 – Dr. Danielle Brager – Mathematically Investigating Retinitis Pigmentosa – Read More

November 30, 2021 – Dr. Natasha Martin – Modeling to Inform a University’s COVID Policies: UC San Diego’s Return to Learn Program – Read More

November 18, 2021 – Dr. Jeremy DeBarry – 10 Simple (not always easy) Tips For a Systems Biology Cyberinfrastructure – Read More

November 4, 2021 – Dr. David Isaacson – Imaging Ventilation and Perfusion Using Electrical Impedance Tomography – Read More

October 28, 2021 – Dr. Daniel Plaugher – Modeling The Pancreatic Cancer Microenvironment in Search of Control Targets – Read More

September 23, 2021 – Dr. Mark Terasaki – Analysis of The Three Dimensional Structure of The Kidney Glomerulus Capillary Network – Read More